Index A | B | C | D | E | F | G | H | L | M | N | O | P | R | S | T | V | W A Acquisition Chunk Acquisition Chunk Duration Acquisition Epoch Acquisition Slice Acquisition Slice Duration activepatch() (in module aeon.analysis.utils) Aeon aeon() (in module aeon.io.api) aeon.analysis.block_plotting module aeon.analysis.movies module aeon.analysis.plotting module aeon.analysis.utils module aeon.io.api module aeon.io.device module aeon.io.reader module aeon.io.video module aeon.metadata.social_02 module aeon.schema.core module aeon.schema.dataset module aeon.schema.foraging module aeon.schema.octagon module aeon.schema.schemas module aeon.schema.social_01 module aeon.schema.social_02 module aeon.schema.social_03 module aeon.schema.streams module aeon.util module Area (class in aeon.schema.foraging) arena (aeon.metadata.social_02.ExperimentMetadata attribute) Arena (aeon.schema.foraging.Area attribute) ArenaMetadata (class in aeon.metadata.social_02) args (aeon.io.device.Device attribute) (aeon.schema.streams.Device attribute) (aeon.schema.streams.StreamGroup attribute) averageframes() (in module aeon.analysis.movies) B BeamBreak (class in aeon.schema.foraging) BitmaskEvent (class in aeon.io.reader) C center_px (aeon.metadata.social_02.ArenaMetadata attribute) Chunk (class in aeon.io.reader) chunk() (in module aeon.io.api) chunk_key() (in module aeon.io.api) chunk_range() (in module aeon.io.api) circle() (in module aeon.analysis.plotting) class_int2str() (aeon.io.reader.Pose static method) collatemovie() (in module aeon.analysis.movies) colorline() (in module aeon.analysis.plotting) columns (aeon.io.reader.Reader attribute) compositeStream() (in module aeon.io.device) Corridor (aeon.schema.foraging.Area attribute) Csv (class in aeon.io.reader) D DeliverPellet (class in aeon.schema.foraging) DepletionFunction (class in aeon.schema.foraging) Device (class in aeon.io.device) (class in aeon.schema.streams) DigitalBitmask (class in aeon.io.reader) distance() (in module aeon.analysis.utils) distancetravelled() (in module aeon.analysis.utils) E Encoder (class in aeon.io.reader) (class in aeon.schema.core) Environment (class in aeon.schema.core) (class in aeon.schema.social_02) Environment.BlockState (class in aeon.schema.social_02) Environment.EnvironmentState (class in aeon.schema.social_02) Environment.LightEvents (class in aeon.schema.social_02) Environment.MessageLog (class in aeon.schema.social_02) EnvironmentState (class in aeon.schema.core) ExperimentMetadata (class in aeon.metadata.social_02) export() (in module aeon.io.video) extension (aeon.io.reader.Reader attribute) F Feeder (class in aeon.schema.foraging) find_nested_key() (in module aeon.util) frames() (in module aeon.io.video) from_dict() (in module aeon.io.reader) G gate_rfid (aeon.metadata.social_02.ExperimentMetadata attribute) gen_hex_grad() (in module aeon.analysis.block_plotting) get_bodyparts() (aeon.io.reader.Pose static method) get_class_names() (aeon.io.reader.Pose static method) get_config_file() (aeon.io.reader.Pose class method) get_events_rates() (in module aeon.analysis.utils) global_fps (aeon.metadata.social_02.VideoControllerMetadata attribute) gridframes() (in module aeon.analysis.movies) gridmovie() (in module aeon.analysis.movies) groupframes() (in module aeon.analysis.movies) H Harp (class in aeon.io.reader) Heartbeat (class in aeon.io.reader) (class in aeon.schema.core) heatmap() (in module aeon.analysis.plotting) L load() (in module aeon.io.api) local_fps (aeon.metadata.social_02.VideoControllerMetadata attribute) location_px (aeon.metadata.social_02.RfidMetadata attribute) Log (class in aeon.io.reader) M MessageLog (class in aeon.schema.core) Metadata (class in aeon.io.reader) (class in aeon.schema.core) module aeon.analysis.block_plotting aeon.analysis.movies aeon.analysis.plotting aeon.analysis.utils aeon.io.api aeon.io.device aeon.io.reader aeon.io.video aeon.metadata.social_02 aeon.schema.core aeon.schema.dataset aeon.schema.foraging aeon.schema.octagon aeon.schema.schemas aeon.schema.social_01 aeon.schema.social_02 aeon.schema.social_03 aeon.schema.streams aeon.util N name (aeon.io.device.Device attribute) (aeon.schema.streams.Device attribute) nest (aeon.metadata.social_02.ExperimentMetadata attribute) Nest (aeon.schema.foraging.Area attribute) nest_rfid1 (aeon.metadata.social_02.ExperimentMetadata attribute) nest_rfid2 (aeon.metadata.social_02.ExperimentMetadata attribute) NestMetadata (class in aeon.metadata.social_02) Null (aeon.schema.foraging.Area attribute) O OSC (class in aeon.schema.octagon) OSC.BackgroundColor (class in aeon.schema.octagon) OSC.ChangeSubjectState (class in aeon.schema.octagon) OSC.EndTrial (class in aeon.schema.octagon) OSC.GratingsSlice (class in aeon.schema.octagon) OSC.Poke (class in aeon.schema.octagon) OSC.Response (class in aeon.schema.octagon) OSC.RunPreTrialNoPoke (class in aeon.schema.octagon) OSC.Slice (class in aeon.schema.octagon) OSC.StartNewSession (class in aeon.schema.octagon) P Patch (class in aeon.schema.foraging) (class in aeon.schema.social_02) Patch.DepletionState (class in aeon.schema.social_02) Patch.Encoder (class in aeon.schema.social_02) Patch.Feeder (class in aeon.schema.social_02) Patch.ManualDelivery (class in aeon.schema.social_02) Patch.MissedPellet (class in aeon.schema.social_02) Patch.RetriedDelivery (class in aeon.schema.social_02) patch1 (aeon.metadata.social_02.ExperimentMetadata attribute) Patch1 (aeon.schema.foraging.Area attribute) patch1_rfid (aeon.metadata.social_02.ExperimentMetadata attribute) patch2 (aeon.metadata.social_02.ExperimentMetadata attribute) Patch2 (aeon.schema.foraging.Area attribute) patch2_rfid (aeon.metadata.social_02.ExperimentMetadata attribute) patch3 (aeon.metadata.social_02.ExperimentMetadata attribute) patch3_rfid (aeon.metadata.social_02.ExperimentMetadata attribute) PatchMetadata (class in aeon.metadata.social_02) path (aeon.schema.streams.Device attribute) (aeon.schema.streams.StreamGroup attribute) pattern (aeon.io.device.Device attribute) (aeon.io.reader.Reader attribute) Photodiode (class in aeon.schema.octagon) pixel_to_cm (aeon.metadata.social_02.ArenaMetadata attribute) point_to_cm() (aeon.metadata.social_02.ArenaMetadata method) Pose (class in aeon.io.reader) (class in aeon.schema.social_01) (class in aeon.schema.social_02) (class in aeon.schema.social_03) Position (class in aeon.io.reader) (class in aeon.schema.core) R radius_cm (aeon.metadata.social_02.ArenaMetadata attribute) (aeon.metadata.social_02.PatchMetadata attribute) radius_px (aeon.metadata.social_02.ArenaMetadata attribute) rate() (in module aeon.analysis.utils) rateplot() (in module aeon.analysis.plotting) read() (aeon.io.reader.BitmaskEvent method) (aeon.io.reader.Chunk method) (aeon.io.reader.Csv method) (aeon.io.reader.DigitalBitmask method) (aeon.io.reader.Encoder method) (aeon.io.reader.Harp method) (aeon.io.reader.Heartbeat method) (aeon.io.reader.Log method) (aeon.io.reader.Metadata method) (aeon.io.reader.Pose method) (aeon.io.reader.Position method) (aeon.io.reader.Reader method) (aeon.io.reader.Subject method) (aeon.io.reader.Video method) reader (aeon.schema.streams.Stream attribute) Reader (class in aeon.io.reader) Region (class in aeon.schema.foraging) RfidEvents (class in aeon.schema.social_01) (class in aeon.schema.social_02) RfidMetadata (class in aeon.metadata.social_02) roi_px (aeon.metadata.social_02.NestMetadata attribute) (aeon.metadata.social_02.PatchMetadata attribute) S Session SessionData (class in aeon.schema.foraging) sessiontime() (in module aeon.analysis.utils) set_ymargin() (in module aeon.analysis.plotting) Stream (class in aeon.schema.streams) StreamGroup (class in aeon.schema.streams) Subject (class in aeon.io.reader) SubjectData (class in aeon.schema.social_02) SubjectData.SubjectState (class in aeon.schema.social_02) SubjectData.SubjectVisits (class in aeon.schema.social_02) SubjectData.SubjectWeight (class in aeon.schema.social_02) SubjectState (class in aeon.schema.core) T Task Protocol TaskLogic (class in aeon.schema.octagon) TaskLogic.DrawBackground (class in aeon.schema.octagon) TaskLogic.GratingsSliceOnset (class in aeon.schema.octagon) TaskLogic.InterTrialInterval (class in aeon.schema.octagon) TaskLogic.PreTrialState (class in aeon.schema.octagon) TaskLogic.Response (class in aeon.schema.octagon) TaskLogic.SliceOnset (class in aeon.schema.octagon) TaskLogic.TrialInitiation (class in aeon.schema.octagon) to_dict() (in module aeon.io.reader) Trial triggerclip() (in module aeon.analysis.movies) V video (aeon.metadata.social_02.ExperimentMetadata attribute) Video (class in aeon.io.reader) (class in aeon.schema.core) VideoControllerMetadata (class in aeon.metadata.social_02) visits() (in module aeon.analysis.utils) W Wall (class in aeon.schema.octagon) Wall.BeamBreak0 (class in aeon.schema.octagon) Wall.BeamBreak1 (class in aeon.schema.octagon) Wall.BeamBreak2 (class in aeon.schema.octagon) Wall.ClearLed0 (class in aeon.schema.octagon) Wall.ClearLed1 (class in aeon.schema.octagon) Wall.ClearLed2 (class in aeon.schema.octagon) Wall.ClearValve0 (class in aeon.schema.octagon) Wall.ClearValve1 (class in aeon.schema.octagon) Wall.ClearValve2 (class in aeon.schema.octagon) Wall.SetLed0 (class in aeon.schema.octagon) Wall.SetLed1 (class in aeon.schema.octagon) Wall.SetLed2 (class in aeon.schema.octagon) Wall.SetValve0 (class in aeon.schema.octagon) Wall.SetValve1 (class in aeon.schema.octagon) Wall.SetValve2 (class in aeon.schema.octagon) Weight (class in aeon.schema.foraging) WeightFiltered (class in aeon.schema.foraging) (class in aeon.schema.social_02) WeightRaw (class in aeon.schema.foraging) (class in aeon.schema.social_02) WeightSubject (class in aeon.schema.foraging)